all paralogous pre-mir class in Macaca mulatta species.
Index ID Class Mature
miRNA
(MatMiR)		 Match/
MatMiR Length		 Chrom Strand MatMiR
Position		 PreMir
Position		 Confidence Evo_
Source		 Species_
No		 Distribution
1 rheMac2-1 mir-627 hsa-miR-627 20/22 chr1 + 34-55 2009795-2009897 0.9883 Paralog 3/4 4/9
2 rheMac2-9 mir-320 hsa-miR-320b 22/22 chr1 + 45-66 146238863-146238940 0.997743 Paralog 8/16 2/38
3 rheMac2-9 mir-320 ptr-miR-320d 18/18 chr1 + 45-62 146238863-146238940 0.998368 Paralog 8/16 2/38
4 rheMac2-9 mir-320 mml-miR-320 20/22 chr1 + 45-64 146238863-146238940 0.996851 Paralog 8/16 2/38
5 rheMac2-5 mir-1241 mml-miR-1241 20/22 chr1 + 51-71 66525189-66525263 0.964502 Paralog 1/2 2/3
6 rheMac2-26 mir-345 mmu-miR-345-5p 21/22 chr1 - 6-27 150460106-150460182 0.846357 Paralog 7/14 3/17
7 rheMac2-19 mir-297 rno-miR-297 21/23 chr1 - 22-43 50066021-50066112 0.977837 Paralog 5/47 28/705
8 rheMac2-17 mir-297 mmu-miR-297a 21/22 chr1 - 48-69 31614918-31615009 0.991031 Paralog 5/47 28/705
9 rheMac2-27 mir-297 mmu-miR-297a 20/22 chr1 - 49-70 163658261-163658351 0.953069 Paralog 5/47 28/705
10 rheMac2-17 mir-297 mml-miR-297 19/20 chr1 - 50-69 31614916-31615011 0.985083 Paralog 5/47 28/705
11 rheMac2-17 mir-297 hsa-miR-297 20/21 chr1 - 50-70 31614916-31615011 0.983796 Paralog 5/47 28/705
12 rheMac2-29 mir-1 mmu-miR-1-2-as 21/21 chr10 + 9-29 1973274-1973350 0.974843 Paralog 41/61 4/166
13 rheMac2-32 mir-297 mml-miR-297 19/20 chr10 + 52-71 48436739-48436830 0.830428 Paralog 5/47 28/705
14 rheMac2-39 mir-511 hsa-miR-511 20/21 chr10 - 32-52 89337544-89337643 0.954649 Paralog 4/8 3/11
15 rheMac2-39 mir-511 mml-miR-511 19/20 chr10 - 34-53 89337541-89337644 0.934333 Paralog 4/8 3/11
16 rheMac2-49 mir-297 mmu-miR-297a 20/22 chr11 - 44-65 17591469-17591554 0.928571 Paralog 5/47 28/705
17 rheMac2-48 mir-129 bfl-miR-129 21/23 chr11 - 49-71 6923809-6923906 0.882492 Paralog 14/32 3/69
18 rheMac2-64 mir-125 sme-miR-125a 21/22 chr12 + 50-71 99494223-99494311 0.897041 Paralog 45/62 6/195
19 rheMac2-65 mir-1224 mmu-miR-1224 19/21 chr12 - 50-69 12751344-12751429 0.987154 Paralog 5/8 3/12
20 rheMac2-73 mir-548 hsa-miR-548o 20/22 chr13 + 45-66 35536175-35536263 0.945364 Paralog 3/5 7/56
21 rheMac2-75 mir-345 bta-miR-345 19/21 chr13 + 51-70 66851000-66851091 0.991336 Paralog 7/14 3/17
22 rheMac2-84 mir-877 hsa-miR-877* 19/21 chr13 - 8-27 133405432-133405509 0.868732 Paralog 5/10 2/13
23 rheMac2-78 mir-217 mmu-miR-217 22/23 chr13 - 17-39 56295871-56295958 0.992985 Paralog 20/37 2/47
24 rheMac2-78 mir-217 cin-miR-217 21/22 chr13 - 17-38 56295871-56295958 0.990375 Paralog 20/37 2/47
25 rheMac2-78 mir-217 gga-miR-217 24/24 chr13 - 18-41 56295870-56295959 0.995402 Paralog 20/37 2/47
26 rheMac2-78 mir-217 mml-miR-217 21/23 chr13 - 20-40 56295870-56295959 0.982714 Paralog 20/37 2/47
27 rheMac2-81 mir-297 mmu-miR-297a 21/22 chr13 - 36-57 74616783-74616889 0.889429 Paralog 5/47 28/705
28 rheMac2-81 mir-297 hsa-miR-297 20/21 chr13 - 36-56 74616784-74616889 0.924395 Paralog 5/47 28/705
29 rheMac2-81 mir-297 mml-miR-297 19/20 chr13 - 36-55 74616784-74616889 0.964395 Paralog 5/47 28/705
30 rheMac2-78 mir-217 oan-miR-217* 22/22 chr13 - 49-70 56295875-56295953 0.991589 Paralog 20/37 2/47
31 rheMac2-83 mir-493 mmu-miR-493 21/23 chr13 - 49-71 133319436-133319516 0.985626 Paralog 6/12 3/18
32 rheMac2-86 mir-297 rno-miR-297 21/23 chr14 + 21-43 24535796-24535880 0.969676 Paralog 5/47 28/705
33 rheMac2-91 mir-125 bfl-miR-125b-as 22/22 chr14 + 51-72 120507560-120507643 0.985078 Paralog 45/62 6/195
34 rheMac2-94 mir-129 mml-miR-129-5p 21/21 chr14 - 10-30 28509128-28509207 0.996966 Paralog 14/32 3/69
35 rheMac2-94 mir-129 dre-miR-129 22/22 chr14 - 11-32 28509127-28509208 0.994984 Paralog 14/32 3/69
36 rheMac2-101 mir-297 hsa-miR-297 19/21 chr14 - 16-35 107071718-107071803 0.971003 Paralog 5/47 28/705
37 rheMac2-92 mir-297 hsa-miR-297 19/21 chr14 - 49-68 1658505-1658592 0.839784 Paralog 5/47 28/705
38 rheMac2-104 mir-199 dre-miR-199* 22/22 chr15 + 26-47 10635493-10635587 0.998476 Paralog 22/39 3/87
39 rheMac2-104 mir-199 mml-miR-199a-3p 22/22 chr15 + 27-48 10635493-10635587 0.996891 Paralog 22/39 3/87
40 rheMac2-104 mir-199 oan-miR-199 21/21 chr15 + 27-47 10635493-10635587 0.997889 Paralog 22/39 3/87
41 rheMac2-107 mir-297 mml-miR-297 18/20 chr15 + 31-48 52340185-52340277 0.993398 Paralog 5/47 28/705
42 rheMac2-109 mir-7 gga-miR-7 20/22 chr15 + 39-60 61938976-61939037 0.800921 Paralog 46/63 4/143
43 rheMac2-109 mir-7 mml-miR-7 21/23 chr15 + 39-61 61938976-61939037 0.807126 Paralog 46/63 4/143
44 rheMac2-109 mir-7 cap-miR-7 22/24 chr15 + 39-62 61938976-61939037 0.808124 Paralog 46/63 4/143
45 rheMac2-103 mir-220 bta-miR-220a 20/22 chr15 + 51-72 1000082-1000175 0.953332 Paralog 10/14 5/27
46 rheMac2-103 mir-220 cfa-miR-220a 20/21 chr15 + 51-71 1000082-1000175 0.921688 Paralog 10/14 5/27
47 rheMac2-113 mir-31 csa-miR-31 19/21 chr15 - 16-35 55496748-55496834 0.999796 Paralog 40/60 2/107
48 rheMac2-119 mir-297 mml-miR-297 19/20 chr16 - 45-64 32376500-32376609 0.94575 Paralog 5/47 28/705
49 rheMac2-119 mir-297 hsa-miR-297 20/21 chr16 - 45-65 32376500-32376609 0.923364 Paralog 5/47 28/705
50 rheMac2-133 mir-1 mmu-miR-1-2-as 21/21 chr18 + 9-29 14835313-14835390 0.900466 Paralog 41/61 4/166
51 rheMac2-141 mir-133 dre-miR-133a* 22/22 chr18 - 15-36 14832030-14832115 0.997732 Paralog 47/64 4/138
52 rheMac2-141 mir-133 mmu-miR-133a* 21/21 chr18 - 16-36 14832030-14832115 0.998095 Paralog 47/64 4/138
53 rheMac2-147 mir-539 mml-miR-539 20/22 chr18 - 29-50 41436608-41436704 0.902091 Paralog 7/12 2/13
54 rheMac2-148 mir-297 mmu-miR-297a 20/22 chr18 - 33-54 55165065-55165161 0.954074 Paralog 5/47 28/705
55 rheMac2-141 mir-133 spu-miR-133 22/23 chr18 - 49-71 14832033-14832112 0.994057 Paralog 47/64 4/138
56 rheMac2-141 mir-133 dme-miR-133 22/22 chr18 - 49-70 14832034-14832111 0.991103 Paralog 47/64 4/138
57 rheMac2-141 mir-133 bfl-miR-133 22/22 chr18 - 49-70 14832035-14832110 0.992195 Paralog 47/64 4/138
58 rheMac2-141 mir-133 mml-miR-133c 22/22 chr18 - 49-70 14832033-14832112 0.989867 Paralog 47/64 4/138
59 rheMac2-141 mir-133 cin-miR-133 21/21 chr18 - 50-70 14832033-14832112 0.980288 Paralog 47/64 4/138
60 rheMac2-141 mir-133 mml-miR-133a 19/21 chr18 - 51-69 14832035-14832110 0.983117 Paralog 47/64 4/138
61 rheMac2-168 mir-516 hsa-miR-516b 22/22 chr19 + 12-33 59844523-59844603 0.999888 Paralog 3/5 3/18
62 rheMac2-170 mir-518 hsa-miR-518a-5p 19/20 chr19 + 13-32 59847855-59847935 0.999855 Paralog 3/5 8/37
63 rheMac2-174 mir-518 hsa-miR-518a-5p 19/20 chr19 + 13-32 59862791-59862871 0.99944 Paralog 3/5 8/37
64 rheMac2-168 mir-519 mml-miR-519a 24/25 chr19 + 48-72 59844528-59844599 0.999014 Paralog 3/5 8/47
65 rheMac2-158 mir-519 mml-miR-519a 24/25 chr19 + 49-73 59794476-59794552 0.999961 Paralog 3/5 8/47
66 rheMac2-176 mir-519 mml-miR-519a 23/25 chr19 + 49-73 59870528-59870607 0.99777 Paralog 3/5 8/47
67 rheMac2-161 mir-519 mml-miR-519a 23/25 chr19 + 49-73 59795289-59795365 0.999206 Paralog 3/5 8/47
68 rheMac2-153 mir-134 ggo-miR-134 20/21 chr19 + 50-70 44338618-44338714 0.968135 Paralog 11/13 2/17
69 rheMac2-154 mir-512 mml-miR-512-3p 21/22 chr19 + 51-72 59770293-59770376 0.998454 Paralog 3/5 3/10
70 rheMac2-176 mir-519 hsa-miR-519a 22/22 chr19 + 51-72 59870526-59870609 0.999465 Paralog 3/5 8/47
71 rheMac2-174 mir-518 mml-miR-518a-3p 21/21 chr19 + 51-71 59862790-59862872 0.999624 Paralog 3/5 8/37
72 rheMac2-163 mir-521 mml-miR-521 21/22 chr19 + 51-72 59806494-59806578 0.866062 Paralog 3/4 3/10
73 rheMac2-170 mir-520 mml-miR-520d-3p 22/22 chr19 + 51-72 59847855-59847935 0.999867 Paralog 3/7 10/47
74 rheMac2-174 mir-520 mml-miR-520d-3p 22/22 chr19 + 51-72 59862791-59862871 0.999703 Paralog 3/7 10/47
75 rheMac2-170 mir-518 mml-miR-518a-3p 21/21 chr19 + 51-71 59847854-59847936 0.999847 Paralog 3/5 8/37
76 rheMac2-172 mir-517 hsa-miR-517a 20/22 chr19 + 51-72 59849827-59849909 0.999965 Paralog 3/4 3/13
77 rheMac2-168 mir-516 hsa-miR-516a-3p 18/18 chr19 + 52-69 59844528-59844599 0.999629 Paralog 3/5 3/18
78 rheMac2-180 mir-29 mml-miR-29a 20/22 chr19 - 10-31 41013570-41013649 0.81812 Paralog 28/46 5/165
79 rheMac2-186 mir-371 cfa-miR-371 21/22 chr19 - 13-34 59895644-59895727 0.962787 Paralog 4/15 3/26
80 rheMac2-187 mir-371 cfa-miR-371 21/22 chr19 - 13-34 59898383-59898466 0.962787 Paralog 4/15 3/26
81 rheMac2-185 mir-523 hsa-miR-523 21/23 chr19 - 46-68 59842542-59842614 0.935975 Paralog 3/4 7/20
82 rheMac2-185 mir-523 mml-miR-523a 20/21 chr19 - 46-66 59842542-59842614 0.906415 Paralog 3/4 7/20
83 rheMac2-184 mir-521 hsa-miR-521 20/22 chr19 - 48-69 59838891-59838964 0.959517 Paralog 3/4 3/10
84 rheMac2-183 mir-523 hsa-miR-523 21/23 chr19 - 49-71 59801660-59801738 0.973106 Paralog 3/4 7/20
85 rheMac2-182 mir-523 hsa-miR-523 21/23 chr19 - 49-71 59795287-59795365 0.839031 Paralog 3/4 7/20
86 rheMac2-181 mir-643 mml-miR-643 21/22 chr19 - 49-70 58324990-58325068 0.999909 Paralog 3/6 2/10
87 rheMac2-193 mir-378 mml-miR-378 19/21 chr2 + 42-61 50038824-50038900 0.81584 Paralog 7/10 2/14
88 rheMac2-203 mir-297 hsa-miR-297 19/21 chr2 - 31-49 62053512-62053611 0.965988 Paralog 5/47 28/705
89 rheMac2-203 mir-297 mmu-miR-297a 20/22 chr2 - 31-50 62053511-62053611 0.972781 Paralog 5/47 28/705
90 rheMac2-203 mir-297 mml-miR-297 18/20 chr2 - 31-48 62053512-62053611 0.986634 Paralog 5/47 28/705
91 rheMac2-202 mir-19 hsa-miR-19a* 20/22 chr2 - 48-69 31372919-31373005 0.85056 Paralog 25/43 4/128
92 rheMac2-208 mir-944 mml-miR-944 21/22 chr2 - 49-70 182150514-182150591 0.999865 Paralog 3/6 2/9
93 rheMac2-214 mir-485 mml-miR-485-5p 20/22 chr20 + 51-72 47669290-47669366 0.988542 Paralog 7/16 2/17
94 rheMac2-218 mir-140 mne-miR-140 19/21 chr20 - 16-35 68318885-68318970 0.998289 Paralog 15/31 2/51
95 rheMac2-217 mir-297 hsa-miR-297 19/21 chr20 - 36-55 26028624-26028729 0.958103 Paralog 5/47 28/705
96 rheMac2-219 mir-125 bfl-miR-125b-as 22/22 chr3 + 51-72 30313859-30313945 0.999481 Paralog 45/62 6/195
97 rheMac2-227 mir-335 mmu-miR-335-3p 20/22 chr3 - 47-68 167886988-167887063 0.999611 Paralog 7/16 2/22
98 rheMac2-224 mir-146 hsa-miR-146a* 20/22 chr3 - 50-70 129259694-129259770 0.970685 Paralog 12/31 3/55
99 rheMac2-225 mir-297 mml-miR-297 18/20 chr3 - 51-68 156128371-156128461 0.962179 Paralog 5/47 28/705
100 rheMac2-237 mir-297 hsa-miR-297 19/21 chr4 + 37-56 94806142-94806241 0.966536 Paralog 5/47 28/705
101 rheMac2-237 mir-297 mmu-miR-297a 20/22 chr4 + 37-57 94806142-94806241 0.966794 Paralog 5/47 28/705
102 rheMac2-229 mir-297 mmu-miR-297a 20/22 chr4 + 42-63 20158105-20158182 0.957783 Paralog 5/47 28/705
103 rheMac2-238 mir-297 mmu-miR-297a 20/22 chr4 + 50-71 107507168-107507258 0.990302 Paralog 5/47 28/705
104 rheMac2-243 mir-297 mml-miR-297 19/20 chr4 - 42-60 56965337-56965446 0.934431 Paralog 5/47 28/705
105 rheMac2-256 mir-297 hsa-miR-297 20/21 chr5 - 43-63 18755912-18756020 0.938708 Paralog 5/47 28/705
106 rheMac2-256 mir-297 mml-miR-297 19/20 chr5 - 43-62 18755912-18756020 0.976098 Paralog 5/47 28/705
107 rheMac2-256 mir-297 mmu-miR-297c 22/22 chr5 - 43-64 18755912-18756020 0.91921 Paralog 5/47 28/705
108 rheMac2-273 mir-103 hsa-miR-103-as 23/23 chr6 + 10-32 164939533-164939612 0.974287 Paralog 21/38 3/118
109 rheMac2-265 mir-580 mml-miR-580 21/22 chr6 + 51-71 35940064-35940142 0.999987 Paralog 3/6 2/10
110 rheMac2-266 mir-545 cfa-miR-545 19/21 chr6 + 52-70 72081588-72081675 0.999274 Paralog 5/9 2/15
111 rheMac2-277 mir-583 mml-miR-583 20/21 chr6 - 16-36 92292833-92292918 0.997989 Paralog 3/4 2/8
112 rheMac2-283 mir-627 hsa-miR-627 22/22 chr7 + 5-26 20609811-20609876 0.999822 Paralog 3/4 4/9
113 rheMac2-283 mir-627 mml-miR-627 21/22 chr7 + 41-62 20609811-20609876 0.999784 Paralog 3/4 4/9
114 rheMac2-286 mir-624 mml-miR-624 20/21 chr7 + 51-71 93961157-93961236 0.999937 Paralog 3/5 2/7
115 rheMac2-288 mir-770 mmu-miR-770-3p 20/22 chr7 + 51-71 156185979-156186068 0.994434 Paralog 5/7 2/9
116 rheMac2-293 mir-376 bta-miR-376d 21/21 chr7 + 51-71 164323844-164323929 0.829198 Paralog 7/19 5/60
117 rheMac2-300 mir-627 hsa-miR-627 21/22 chr7 - 5-26 20609810-20609875 0.999427 Paralog 3/4 4/9
118 rheMac2-311 mir-299 mml-miR-299-5p 21/22 chr7 - 23-43 164309571-164309663 0.999616 Paralog 6/18 2/37
119 rheMac2-306 mir-297 mmu-miR-297a 20/22 chr7 - 34-55 102281178-102281276 0.832836 Paralog 5/47 28/705
120 rheMac2-300 mir-627 mml-miR-627 22/22 chr7 - 41-62 20609810-20609875 0.999882 Paralog 3/4 4/9
121 rheMac2-299 mir-1224 mmu-miR-1224 20/21 chr7 - 50-70 12825347-12825434 0.825845 Paralog 5/8 3/12
122 rheMac2-315 mir-297 mmu-miR-297a 20/22 chr8 + 51-72 105642916-105642996 0.992865 Paralog 5/47 28/705
123 rheMac2-321 mir-486 mml-miR-486-5p 22/22 chr8 - 11-32 42215493-42215574 0.991327 Paralog 5/16 2/32
124 rheMac2-319 mir-92 hsa-miR-92a-2* 20/22 chr8 - 27-48 29919054-29919150 0.833169 Paralog 47/65 4/170
125 rheMac2-326 mir-297 mml-miR-297 18/20 chr8 - 32-49 131561498-131561596 0.857955 Paralog 5/47 28/705
126 rheMac2-324 mir-143 hsa-miR-143* 20/22 chr8 - 48-69 75681823-75681893 0.972947 Paralog 15/29 2/33
127 rheMac2-321 mir-486 mml-miR-486-3p 21/21 chr8 - 50-70 42215496-42215571 0.998157 Paralog 5/16 2/32
128 rheMac2-317 mir-297 mmu-miR-297a 20/22 chr8 - 50-70 20639762-20639869 0.863367 Paralog 5/47 28/705
129 rheMac2-317 mir-297 hsa-miR-297 19/21 chr8 - 50-69 20639762-20639869 0.804913 Paralog 5/47 28/705
130 rheMac2-330 mir-452 mml-miR-452 20/22 chr9 + 25-45 100596660-100596753 0.828509 Paralog 6/17 2/19
131 rheMac2-327 mir-297 rno-miR-297 21/23 chr9 + 30-52 4025311-4025410 0.985242 Paralog 5/47 28/705
132 rheMac2-331 mir-493 hsa-miR-493* 20/22 chr9 + 51-72 111275681-111275767 0.945197 Paralog 6/12 3/18
133 rheMac2-338 mir-492 ptr-miR-492 21/22 chr9 - 17-38 68985156-68985240 0.851181 Paralog 3/6 2/9
134 rheMac2-344 mir-297 mml-miR-297 19/20 chrX + 9-28 25573362-25573428 0.949426 Paralog 5/47 28/705
135 rheMac2-347 mir-500 mml-miR-500 23/23 chrX + 12-34 47647180-47647261 0.999867 Paralog 7/16 2/24
136 rheMac2-356 mir-297 hsa-miR-297 20/21 chrX - 14-34 15269257-15269316 0.978916 Paralog 5/47 28/705
137 rheMac2-356 mir-297 mml-miR-297 19/20 chrX - 14-33 15269257-15269316 0.990591 Paralog 5/47 28/705
138 rheMac2-356 mir-297 mmu-miR-297a 21/22 chrX - 14-35 15269257-15269316 0.970955 Paralog 5/47 28/705
139 rheMac2-358 let-7 mml-let-7a 20/22 chrX - 49-70 26343835-26343918 0.952256 Paralog 44/65 12/337
140 rheMac2-364 mir-514 cfa-miR-514 22/23 chrX - 49-71 145369796-145369877 0.999705 Paralog 7/17 3/30
141 rheMac2-364 mir-514 mml-miR-514 20/21 chrX - 50-70 145369797-145369876 0.999643 Paralog 7/17 3/30
142 rheMac2-364 mir-514 ssy-miR-514 19/20 chrX - 50-69 145369797-145369876 0.999511 Paralog 7/17 3/30
Total 142 record(s).